The distribution of microsatellites in the Nasonia parasitoid wasp genome

B. A. Pannebakker, O. Niehuis, A. Hedley, J. Gadau, David Michael Shuker

Research output: Contribution to journalArticlepeer-review

38 Citations (Scopus)

Abstract

Microsatellites are important molecular markers used in numerous genetic contexts. Despite this widespread use, the evolutionary processes governing microsatellite distribution and diversity remain controversial. Here, we present results on the distribution of microsatellites of three species in the parasitic wasp genus Nasonia generated by an in silico data-mining approach. Our results show that the overall microsatellite density in Nasonia is comparable to that of the honey bee, but much higher than in eight non-Hymenopteran arthropods. Across the Nasonia vitripennis genome, microsatellite density varied both within and amongst chromosomes. In contrast to other taxa, dinucleotides are the most abundant repeat type in all four species of Hymenoptera studied. Whether the differences between the Hymenoptera and other taxa are of functional significance remains to be determined.

Original languageEnglish
Pages (from-to)91-98
Number of pages8
JournalInsect Molecular Biology
Volume19
DOIs
Publication statusPublished - Feb 2010

Keywords

  • evolutionary genomics
  • microsatellites
  • comparative analysis
  • arthropods
  • Nasonia
  • MESSENGER-RNA LOCALIZATION
  • QUANTITATIVE TRAIT LOCI
  • DNA MISMATCH REPAIR
  • NATURAL-POPULATIONS
  • REPEAT INSTABILITY
  • EUKARYOTIC GENOMES
  • HYBRID BREAKDOWN
  • HYMENOPTERA
  • MARKERS
  • PTEROMALIDAE

Fingerprint

Dive into the research topics of 'The distribution of microsatellites in the Nasonia parasitoid wasp genome'. Together they form a unique fingerprint.

Cite this