The complete chloroplast genome sequence of Opuntia sulphurea (Cactaceae)

Jinyuan Chen; Shangzhe Zhang; Weidong Tang; Xin Du; Yang Yuan; Shengdan Wu

doi:10.1080/23802359.2022.2035837

The complete chloroplast genome sequence of Opuntia sulphurea (Cactaceae)

Jinyuan Chen, Shangzhe Zhang, Weidong Tang, Xin Du, Yang Yuan, Shengdan Wu^*

^*Corresponding author for this work

School of Biology

Research output: Contribution to journal › Article › peer-review

Abstract

Opuntia sulphurea Gillies ex Salm-Dyck 1834 (Cactaceae) acts as an invasive species due to its ability to survive in various environments. In this study, we assembled the complete chloroplast (cp) genome of Opuntia sulphurea, which was 122,740 bp in length. The genome contained 100 genes, including 65 protein-coding genes, 31 tRNA genes and four rRNA genes. The base composition of the chloroplast genome was 32.11% A, 17.74% G, 18.34% C, and 31.80% T, resulting in an overall G + C content of 35.39%. A phylogenetic analysis across 23 species in Caryophyllales demonstrated a close relationship between Opuntia sulphurea and Opuntia quimilo.

Original language	English
Pages (from-to)	361-362
Number of pages	2
Journal	Mitochondrial DNA Part B: Resources
Volume	7
Issue number	2
DOIs	https://doi.org/10.1080/23802359.2022.2035837
Publication status	Published - 10 Feb 2022

Keywords

Opuntia sulphurea
Cactaceae
Chloroplast genome

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10.1080/23802359.2022.2035837Licence: CC BY-NC

The complete chloroplast genome sequence of Opuntia sulphurea (Cactaceae) (dataset)
Zhang, S. (Contributor), NCBI GenBank, 2024
https://www.ncbi.nlm.nih.gov/bioproject/PRJNA739272/ and one more link, https://www.ncbi.nlm.nih.gov/biosample/SAMN19778433/ (show fewer)
Dataset

Cite this

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title = "The complete chloroplast genome sequence of Opuntia sulphurea (Cactaceae)",

abstract = "Opuntia sulphurea Gillies ex Salm-Dyck 1834 (Cactaceae) acts as an invasive species due to its ability to survive in various environments. In this study, we assembled the complete chloroplast (cp) genome of Opuntia sulphurea, which was 122,740 bp in length. The genome contained 100 genes, including 65 protein-coding genes, 31 tRNA genes and four rRNA genes. The base composition of the chloroplast genome was 32.11% A, 17.74% G, 18.34% C, and 31.80% T, resulting in an overall G + C content of 35.39%. A phylogenetic analysis across 23 species in Caryophyllales demonstrated a close relationship between Opuntia sulphurea and Opuntia quimilo.",

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T1 - The complete chloroplast genome sequence of Opuntia sulphurea (Cactaceae)

AU - Chen, Jinyuan

AU - Zhang, Shangzhe

AU - Tang, Weidong

AU - Du, Xin

AU - Yuan, Yang

AU - Wu, Shengdan

N1 - Funding: This work was supported by the startup funding of Lanzhou University (S. W.).

PY - 2022/2/10

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N2 - Opuntia sulphurea Gillies ex Salm-Dyck 1834 (Cactaceae) acts as an invasive species due to its ability to survive in various environments. In this study, we assembled the complete chloroplast (cp) genome of Opuntia sulphurea, which was 122,740 bp in length. The genome contained 100 genes, including 65 protein-coding genes, 31 tRNA genes and four rRNA genes. The base composition of the chloroplast genome was 32.11% A, 17.74% G, 18.34% C, and 31.80% T, resulting in an overall G + C content of 35.39%. A phylogenetic analysis across 23 species in Caryophyllales demonstrated a close relationship between Opuntia sulphurea and Opuntia quimilo.

AB - Opuntia sulphurea Gillies ex Salm-Dyck 1834 (Cactaceae) acts as an invasive species due to its ability to survive in various environments. In this study, we assembled the complete chloroplast (cp) genome of Opuntia sulphurea, which was 122,740 bp in length. The genome contained 100 genes, including 65 protein-coding genes, 31 tRNA genes and four rRNA genes. The base composition of the chloroplast genome was 32.11% A, 17.74% G, 18.34% C, and 31.80% T, resulting in an overall G + C content of 35.39%. A phylogenetic analysis across 23 species in Caryophyllales demonstrated a close relationship between Opuntia sulphurea and Opuntia quimilo.

KW - Opuntia sulphurea

KW - Cactaceae

KW - Chloroplast genome

U2 - 10.1080/23802359.2022.2035837

DO - 10.1080/23802359.2022.2035837

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JO - Mitochondrial DNA Part B: Resources

JF - Mitochondrial DNA Part B: Resources

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The complete chloroplast genome sequence of Opuntia sulphurea (Cactaceae)

Abstract

Keywords

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Datasets

The complete chloroplast genome sequence of Opuntia sulphurea (Cactaceae) (dataset)

Cite this