Optimization and evaluation of parallel I/O in BIPS3D parallel irregular application

Rosa Filgueira; David E. Singh; Florin Isaila; Jesús Carretero; Antonio García Loureiro

doi:10.1109/IPDPS.2007.370585

Optimization and evaluation of parallel I/O in BIPS3D parallel irregular application

Rosa Filgueira^*, David E. Singh, Florin Isaila, Jesús Carretero, Antonio García Loureiro

^*Corresponding author for this work

School of Computer Science

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Abstract

This paper presents the optimization and evaluation of parallel I/O for the BIPS3D parallel irregular application, a 3-dimensional simulation of BJT and HBT bipolar devices. The parallel version of BIPS3D employs Metis, a library for partitioning graphs, finite element meshes, or sparse matrices. First, we show how the partitioning information provided by Metis can be used in order to improve the performance of parallel I/O. Second, we propose a novel technique, called Interval Data Grouping (IDG), which exploits the data replication of mesh nodes for optimizing the scheduling of the parallel file operations. Finally, we evaluate the parallel I/O version of BIPS3D for various existing parallel I/O techniques and present an in-depth analysis of the IDG performance.

Original language	English
Title of host publication	Proceedings - 21st International Parallel and Distributed Processing Symposium, IPDPS 2007; Abstracts and CD-ROM
DOIs	https://doi.org/10.1109/IPDPS.2007.370585
Publication status	Published - 2007
Event	21st International Parallel and Distributed Processing Symposium, IPDPS 2007 - Long Beach, CA, United States Duration: 26 Mar 2007 → 30 Mar 2007

Publication series

Name	Proceedings - 21st International Parallel and Distributed Processing Symposium, IPDPS 2007; Abstracts and CD-ROM

Conference

Conference	21st International Parallel and Distributed Processing Symposium, IPDPS 2007
Country/Territory	United States
City	Long Beach, CA
Period	26/03/07 → 30/03/07

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10.1109/IPDPS.2007.370585

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Filgueira, R., Singh, D. E., Isaila, F., Carretero, J., & Loureiro, A. G. (2007). Optimization and evaluation of parallel I/O in BIPS3D parallel irregular application. In Proceedings - 21st International Parallel and Distributed Processing Symposium, IPDPS 2007; Abstracts and CD-ROM Article 4228313 (Proceedings - 21st International Parallel and Distributed Processing Symposium, IPDPS 2007; Abstracts and CD-ROM). https://doi.org/10.1109/IPDPS.2007.370585

Filgueira, Rosa ; Singh, David E. ; Isaila, Florin et al. / Optimization and evaluation of parallel I/O in BIPS3D parallel irregular application. Proceedings - 21st International Parallel and Distributed Processing Symposium, IPDPS 2007; Abstracts and CD-ROM. 2007. (Proceedings - 21st International Parallel and Distributed Processing Symposium, IPDPS 2007; Abstracts and CD-ROM).

@inproceedings{d8829c0eddf14f14a3760b95a84b3783,

title = "Optimization and evaluation of parallel I/O in BIPS3D parallel irregular application",

abstract = "This paper presents the optimization and evaluation of parallel I/O for the BIPS3D parallel irregular application, a 3-dimensional simulation of BJT and HBT bipolar devices. The parallel version of BIPS3D employs Metis, a library for partitioning graphs, finite element meshes, or sparse matrices. First, we show how the partitioning information provided by Metis can be used in order to improve the performance of parallel I/O. Second, we propose a novel technique, called Interval Data Grouping (IDG), which exploits the data replication of mesh nodes for optimizing the scheduling of the parallel file operations. Finally, we evaluate the parallel I/O version of BIPS3D for various existing parallel I/O techniques and present an in-depth analysis of the IDG performance.",

author = "Rosa Filgueira and Singh, {David E.} and Florin Isaila and Jes{\'u}s Carretero and Loureiro, {Antonio Garc{\'i}a}",

year = "2007",

doi = "10.1109/IPDPS.2007.370585",

language = "English",

isbn = "1424409101",

series = "Proceedings - 21st International Parallel and Distributed Processing Symposium, IPDPS 2007; Abstracts and CD-ROM",

booktitle = "Proceedings - 21st International Parallel and Distributed Processing Symposium, IPDPS 2007; Abstracts and CD-ROM",

note = "21st International Parallel and Distributed Processing Symposium, IPDPS 2007 ; Conference date: 26-03-2007 Through 30-03-2007",

}

Filgueira, R, Singh, DE, Isaila, F, Carretero, J & Loureiro, AG 2007, Optimization and evaluation of parallel I/O in BIPS3D parallel irregular application. in Proceedings - 21st International Parallel and Distributed Processing Symposium, IPDPS 2007; Abstracts and CD-ROM., 4228313, Proceedings - 21st International Parallel and Distributed Processing Symposium, IPDPS 2007; Abstracts and CD-ROM, 21st International Parallel and Distributed Processing Symposium, IPDPS 2007, Long Beach, CA, United States, 26/03/07. https://doi.org/10.1109/IPDPS.2007.370585

Optimization and evaluation of parallel I/O in BIPS3D parallel irregular application. / Filgueira, Rosa; Singh, David E.; Isaila, Florin et al.
Proceedings - 21st International Parallel and Distributed Processing Symposium, IPDPS 2007; Abstracts and CD-ROM. 2007. 4228313 (Proceedings - 21st International Parallel and Distributed Processing Symposium, IPDPS 2007; Abstracts and CD-ROM).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

TY - GEN

T1 - Optimization and evaluation of parallel I/O in BIPS3D parallel irregular application

AU - Filgueira, Rosa

AU - Singh, David E.

AU - Isaila, Florin

AU - Carretero, Jesús

AU - Loureiro, Antonio García

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N2 - This paper presents the optimization and evaluation of parallel I/O for the BIPS3D parallel irregular application, a 3-dimensional simulation of BJT and HBT bipolar devices. The parallel version of BIPS3D employs Metis, a library for partitioning graphs, finite element meshes, or sparse matrices. First, we show how the partitioning information provided by Metis can be used in order to improve the performance of parallel I/O. Second, we propose a novel technique, called Interval Data Grouping (IDG), which exploits the data replication of mesh nodes for optimizing the scheduling of the parallel file operations. Finally, we evaluate the parallel I/O version of BIPS3D for various existing parallel I/O techniques and present an in-depth analysis of the IDG performance.

AB - This paper presents the optimization and evaluation of parallel I/O for the BIPS3D parallel irregular application, a 3-dimensional simulation of BJT and HBT bipolar devices. The parallel version of BIPS3D employs Metis, a library for partitioning graphs, finite element meshes, or sparse matrices. First, we show how the partitioning information provided by Metis can be used in order to improve the performance of parallel I/O. Second, we propose a novel technique, called Interval Data Grouping (IDG), which exploits the data replication of mesh nodes for optimizing the scheduling of the parallel file operations. Finally, we evaluate the parallel I/O version of BIPS3D for various existing parallel I/O techniques and present an in-depth analysis of the IDG performance.

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Filgueira R, Singh DE, Isaila F, Carretero J, Loureiro AG. Optimization and evaluation of parallel I/O in BIPS3D parallel irregular application. In Proceedings - 21st International Parallel and Distributed Processing Symposium, IPDPS 2007; Abstracts and CD-ROM. 2007. 4228313. (Proceedings - 21st International Parallel and Distributed Processing Symposium, IPDPS 2007; Abstracts and CD-ROM). doi: 10.1109/IPDPS.2007.370585

Optimization and evaluation of parallel I/O in BIPS3D parallel irregular application

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