MOSAL: software tools for multiobjective sequence alignment

Luís Paquete, Pedro Matias, Maryam Abbasi, Miguel Monsanto Pinheiro

Research output: Contribution to journalArticlepeer-review

3 Citations (Scopus)
5 Downloads (Pure)

Abstract

Multiobjective sequence alignment brings the advantage of providing a set of alignments that represent the trade-off between performing insertion/deletions and matching symbols from both sequences. Each of these alignments provide a potential explanation of the relationship between the sequences. We introduce MOSAL, a software tool that provides an open-source implementation and an on-line application for multiobjective pairwise sequence alignment.
Original languageEnglish
Article number2
JournalSource Code for Biology and Medicine
Volume9
DOIs
Publication statusPublished - 8 Jan 2014

Keywords

  • Pairwise sequence alignment
  • Multiobjective optimization
  • Dynamic programming

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