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Microbiome-derived carnitine mimics as previously unknown mediators of gut-brain axis communication

  • Heather Hulme
  • , Lynsey M. Meikle
  • , Nicole Strittmatter
  • , Justin J.J. van der Hooft
  • , John Swales
  • , Ryan A. Bragg
  • , Victor H. Villar
  • , Michael J. Ormsby
  • , Stephanie Barnes
  • , Sheila L. Brown
  • , Alex Dexter
  • , Maya T. Kamat
  • , Jasper C. Komen
  • , Daniel Walker
  • , Simon Milling
  • , Emily K. Osterweil
  • , Andrew S. MacDonald
  • , Chris J. Schofield
  • , Saverio Tardito
  • , Josephine Bunch
  • Gillian Douce, Julia M. Edgar, Ru Angelie Edrada-Ebel, Richard J.A. Goodwin, Richard Burchmore, Daniel M. Wall*
*Corresponding author for this work

Research output: Contribution to journalArticlepeer-review

Abstract

Alterations to the gut microbiome are associated with various neurological diseases, yet evidence of causality and identity of microbiome-derived compounds that mediate gut-brain axis interaction remain elusive. Here, we identify two previously unknown bacterial metabolites 3-methyl-4-(trimethylammonio)butanoate and 4-(trimethylammonio)pentanoate, structural analogs of carnitine that are present in both gut and brain of specific pathogen-free mice but absent in germ-free mice. We demonstrate that these compounds are produced by anaerobic commensal bacteria from the family Lachnospiraceae (Clostridiales) family, colocalize with carnitine in brain white matter, and inhibit carnitine-mediated fatty acid oxidation in a murine cell culture model of central nervous system white matter. This is the first description of direct molecular inter-kingdom exchange between gut prokaryotes and mammalian brain cells, leading to inhibition of brain cell function.

Original languageEnglish
Article numbereaax6328
JournalScience Advances
Volume6
Issue number11
DOIs
Publication statusPublished - 2020

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