MACiE (Mechanism, Annotation and Classification in Enzymes): novel tools for searching catalytic mechanisms

Gemma L. Holliday; Daniel E. Almonacid; Gail J. Bartlett; Noel M. O'Boyle; James W. Torrance; Peter Murray-Rust; John Blayney Owen Mitchell; Janet M. Thornton

doi:10.1093/nar/gkl774

MACiE (Mechanism, Annotation and Classification in Enzymes): novel tools for searching catalytic mechanisms

Gemma L. Holliday, Daniel E. Almonacid, Gail J. Bartlett, Noel M. O'Boyle, James W. Torrance, Peter Murray-Rust, John Blayney Owen Mitchell, Janet M. Thornton

Research output: Contribution to journal › Article › peer-review

Abstract

MACiE (Mechanism, Annotation and Classification in Enzymes) is a database of enzyme reaction mechanisms, and is publicly available as a web-based data resource. This paper presents the first release of a web-based search tool to explore enzyme reaction mechanisms in MACiE. We also present Version 2 of MACiE, which doubles the dataset available (from Version 1). MACiE can be accessed from http://www.ebi.ac.uk/thornton-srv/databases/MACIE/.

Original language	English
Pages (from-to)	515-520
Number of pages	6
Journal	Nucleic Acids Research
Volume	35
Issue number	Suppl 1
Early online date	1 Nov 2006
DOIs	https://doi.org/10.1093/nar/gkl774
Publication status	Published - Jan 2007

Keywords

Protein data-bank
Database

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10.1093/nar/gkl774

MACiE (Mechanism, Annotation and Classification in Enzymes): novel tools for searching catalytic mechanisms
© 2006 The Author(s) This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
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title = "MACiE (Mechanism, Annotation and Classification in Enzymes): novel tools for searching catalytic mechanisms",

abstract = "MACiE (Mechanism, Annotation and Classification in Enzymes) is a database of enzyme reaction mechanisms, and is publicly available as a web-based data resource. This paper presents the first release of a web-based search tool to explore enzyme reaction mechanisms in MACiE. We also present Version 2 of MACiE, which doubles the dataset available (from Version 1). MACiE can be accessed from http://www.ebi.ac.uk/thornton-srv/databases/MACIE/.",

keywords = "Protein data-bank, Database",

author = "Holliday, \{Gemma L.\} and Almonacid, \{Daniel E.\} and Bartlett, \{Gail J.\} and O'Boyle, \{Noel M.\} and Torrance, \{James W.\} and Peter Murray-Rust and Mitchell, \{John Blayney Owen\} and Thornton, \{Janet M.\}",

note = "This work is funded by the UK EPSRC and BBSRC (grant BB/C51320X/1)",

year = "2007",

month = jan,

doi = "10.1093/nar/gkl774",

language = "English",

volume = "35",

pages = "515--520",

journal = "Nucleic Acids Research",

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AU - Holliday, Gemma L.

AU - Almonacid, Daniel E.

AU - Bartlett, Gail J.

AU - O'Boyle, Noel M.

AU - Torrance, James W.

AU - Murray-Rust, Peter

AU - Mitchell, John Blayney Owen

AU - Thornton, Janet M.

N1 - This work is funded by the UK EPSRC and BBSRC (grant BB/C51320X/1)

PY - 2007/1

Y1 - 2007/1

N2 - MACiE (Mechanism, Annotation and Classification in Enzymes) is a database of enzyme reaction mechanisms, and is publicly available as a web-based data resource. This paper presents the first release of a web-based search tool to explore enzyme reaction mechanisms in MACiE. We also present Version 2 of MACiE, which doubles the dataset available (from Version 1). MACiE can be accessed from http://www.ebi.ac.uk/thornton-srv/databases/MACIE/.

AB - MACiE (Mechanism, Annotation and Classification in Enzymes) is a database of enzyme reaction mechanisms, and is publicly available as a web-based data resource. This paper presents the first release of a web-based search tool to explore enzyme reaction mechanisms in MACiE. We also present Version 2 of MACiE, which doubles the dataset available (from Version 1). MACiE can be accessed from http://www.ebi.ac.uk/thornton-srv/databases/MACIE/.

KW - Protein data-bank

KW - Database

UR - https://www.scopus.com/pages/publications/33846120419

U2 - 10.1093/nar/gkl774

DO - 10.1093/nar/gkl774

M3 - Article

SN - 0305-1048

VL - 35

SP - 515

EP - 520

JO - Nucleic Acids Research

JF - Nucleic Acids Research

IS - Suppl 1

ER -

MACiE (Mechanism, Annotation and Classification in Enzymes): novel tools for searching catalytic mechanisms

Abstract

Keywords

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