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Abstract
We have studied the T. versicolor laccase T1 site redox potential (RP) at the M06/6-311++G**/SDD(Cu) level of theory, employing QM/MM optimised geometries (RI-BP86/def2-SVP/def2-TZVP(Cu):CHARMM) of the whole protein system with electronic embedding. The oxidation state of the trinuclear cluster was found to affect the T1 site RP by about 0.2-0.3 V, depending on the protein protonation state. The computed laccase RP can be drastically lowered upon introduction of a protonation state corresponding to a neutral environment, by up to -1.37 V, which is likely an overestimation of the effect in vivo. The gradual change of the protonation state by single points without optimisation or equilibration results in a change that is even larger, namely up to about -2.6 V. Thus, the preferred protein conformation supports a high redox potential, compensating for the RP-lowering effect of surface charges. The predicted change in RP on going to the F463M mutant, ca. -0.1 V, is consistent with observations for a related laccase. Based on our results, we also propose and test a D206N mutant, but find it to be locked in a conformation with slightly lower RP.
Original language | English |
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Pages (from-to) | 9265-9276 |
Number of pages | 12 |
Journal | Journal of Physical Chemistry B |
Volume | 120 |
Issue number | 35 |
Early online date | 17 Aug 2016 |
DOIs | |
Publication status | Published - 8 Sept 2016 |
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Dive into the research topics of 'Laccase redox potentials: pH dependence and mutants, a QM/MM study'. Together they form a unique fingerprint.Projects
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Clean catalysis for sustainable develop: Clean catalysis for sustainable development
Buehl, M. (PI)
1/11/12 → 31/10/17
Project: Standard
Datasets
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Data underpinning "Laccase Redox Potentials: pH Dependence and Mutants - A QM/MM Study"
Goetze, J. P. (Creator) & Buehl, M. (Creator), University of St Andrews, 24 Aug 2016
DOI: 10.17630/c21c5cf3-6380-4428-9a8b-cca3c58498c6
Dataset
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