Abstract
Two sulfanylidene-1,2,3,4-tetrahydropyrimidine derivatives have been synthesized using acid-catalysed cyclocondensation reactions between thiourea, ethyl 3-oxobutanoate and substituted benzaldehydes. In each of ethyl (4RS)-4-(4-benzyloxyphenyl)-6-methyl-2-sulfanylidene-1,2,3,4-tetrahydropyrimidine-5-carboxylate, C21H22N2O3S, (I), where Z′ = 2, and ethyl (4RS)-4-(4-methoxyphenyl)-6-methyl-2-sulfanylidene-1,2,3,4-tetrahydropyrimidine-5-carboxylate 0.105-hydrate, C15H18N2O3S.0.105H2O, (II), the reduced pyrimidine ring adopts a conformation intermediate between the boat, screw-boat and twist-boat forms. In (I) and (II), a combination of N - H⋯O and N - H⋯S hydrogen bonds links the organic molecules into ribbons containing alternating R 2 2(8) and R 4 4(20) rings. In (I), the ribbon contains three types of ring, viz. two different R 2 2(8) rings which are both centrosymmetric and R 4 4(20) rings which are not centrosymmetric. In (II), the ribbon contains two types of ring, both of which are centrosymmetric. In compound (II), the ribbons enclose continuous channels which run along the twofold rotation axes in the space group C2/c, and the partial-occupancy water molecules lie within these channels. Structural comparisons are made with a number of related compounds.
Original language | English |
---|---|
Pages (from-to) | 59-64 |
Number of pages | 6 |
Journal | Acta Crystallographica Section C Structural Chemistry |
Volume | 71 |
Issue number | 1 |
DOIs | |
Publication status | Published - Jan 2015 |
Keywords
- Racemic 1,2,3,4-tetrahydropyrimidine-5-carboxylate esters
- Cyclocondensation reaction
- N-H...O and N-H...S hydrogen bonding
- Crystal structure
- Multicomponent reactions
Fingerprint
Dive into the research topics of 'Ethyl (4-benzyloxyphenyl)-6-methyl-2-sulfanylidene-1,2,3,4-tetrahydropyrimidine-5-carboxylate and a redetermination of ethyl (4RS)-4-(4-methoxyphenyl)-6-methyl-2-sulfanylidene-1,2,3,4-tetrahydropyrimidine-5-carboxylate, as its 0.105-hydrate, both at 200K: subtly different hydrogen-bonded ribbons'. Together they form a unique fingerprint.Datasets
-
Ethyl (4-benzyloxyphenyl)-6-methyl-2-sulfanylidene-1,2,3,4-tetrahydropyrimidine-5-carboxylate and a redetermination of ethyl (4RS)-4-(4-methoxyphenyl)-6-methyl-2-sulfanylidene-1,2,3,4-tetrahydropyrimidine-5-carboxylate, as its 0.105-hydrate, both at 200K: subtly different hydrogen-bonded ribbons (dataset)
Sarojini, B. K. (Creator), Yathirajan, H. S. (Creator), Hosten, E. C. (Creator), Betz, R. (Creator) & Glidewell, C. (Creator), Cambridge Crystallographic Data Centre, 2015
https://dx.doi.org/10.5517/cc13tzpl and one more link, https://dx.doi.org/10.5517/cc13tzqm (show fewer)
Dataset