Conference report: The second bacterial genome sequencing Pan-European Network conference

Kuangyi Charles Wei; Srinithi Purushothaman; Francesca Azzato; Kate S. Baker; Kira Waagner Birkeland; Sofia Brunet; Josefina Campos; Thomas R. Connor; Christian G. Giske; Gilbert Greub; Erika Tång Hallbäck; Dag Harmsen; Emma B. Hodcroft; Matthew T.G. Holden; Jobin Jacob; Andre Kahles; Amaya Campillay Lagos; Samuel Lipworth; Elin Loo; Paolo Miotto; Richard A. Neher; Aitana Neves; Derren Ready; Tim Roloff; Ashley Rooney; Emilie Rousseau; Jacques Schrenzel; Martin Sundqvist; Sofia Viegas; Fanny Wegner; Hege Vangstein Aamot; Stefan Niemann; Deborah A. Williamson; Paula Mölling; Adrian Egli

doi:10.1016/j.micinf.2025.105557

Conference report: The second bacterial genome sequencing Pan-European Network conference

Kuangyi Charles Wei, Srinithi Purushothaman, Francesca Azzato, Kate S. Baker, Kira Waagner Birkeland, Sofia Brunet, Josefina Campos, Thomas R. Connor, Christian G. Giske, Gilbert Greub, Erika Tång Hallbäck, Dag Harmsen, Emma B. Hodcroft, Matthew T.G. Holden, Jobin Jacob, Andre Kahles, Amaya Campillay Lagos, Samuel Lipworth, Elin Loo, Paolo MiottoRichard A. Neher, Aitana Neves, Derren Ready, Tim Roloff, Ashley Rooney, Emilie Rousseau, Jacques Schrenzel, Martin Sundqvist, Sofia Viegas, Fanny Wegner, Hege Vangstein Aamot, Stefan Niemann, Deborah A. Williamson, Paula Mölling, Adrian Egli^*

^*Corresponding author for this work

Research output: Contribution to journal › Article › peer-review

Original language	English
Article number	105557
Pages (from-to)	1-8
Number of pages	8
Journal	Microbes and Infection
Volume	27
Issue number	7
Early online date	8 Aug 2025
DOIs	https://doi.org/10.1016/j.micinf.2025.105557
Publication status	Published - 23 Oct 2025

Keywords

Education
Whole genome sequencing
Data
Surveillance
Diagnostics
Workshop
Antimicrobial resistance
Pathogen identification

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Wei-et-al-2025-Conference-report-Second-bacterial-genome-Microbes&Infec-27-105557-CCBY
Copyright © 2025 The Authors. Published by Elsevier Masson SAS on behalf of Institut Pasteur. This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
Final published version, 2.84 MBLicence: CC BY

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Wei, K. C., Purushothaman, S., Azzato, F., Baker, K. S., Birkeland, K. W., Brunet, S., Campos, J., Connor, T. R., Giske, C. G., Greub, G., Hallbäck, E. T., Harmsen, D., Hodcroft, E. B., Holden, M. T. G., Jacob, J., Kahles, A., Lagos, A. C., Lipworth, S., Loo, E., ... Egli, A. (2025). Conference report: The second bacterial genome sequencing Pan-European Network conference. Microbes and Infection, 27(7), 1-8. Article 105557. https://doi.org/10.1016/j.micinf.2025.105557

@article{60367f02e22f4e36ba9fb633be3a15c2,

title = "Conference report: The second bacterial genome sequencing Pan-European Network conference",

keywords = "Education, Whole genome sequencing, Data, Surveillance, Diagnostics, Workshop, Antimicrobial resistance, Pathogen identification",

author = "Wei, \{Kuangyi Charles\} and Srinithi Purushothaman and Francesca Azzato and Baker, \{Kate S.\} and Birkeland, \{Kira Waagner\} and Sofia Brunet and Josefina Campos and Connor, \{Thomas R.\} and Giske, \{Christian G.\} and Gilbert Greub and Hallb{\"a}ck, \{Erika T{\aa}ng\} and Dag Harmsen and Hodcroft, \{Emma B.\} and Holden, \{Matthew T.G.\} and Jobin Jacob and Andre Kahles and Lagos, \{Amaya Campillay\} and Samuel Lipworth and Elin Loo and Paolo Miotto and Neher, \{Richard A.\} and Aitana Neves and Derren Ready and Tim Roloff and Ashley Rooney and Emilie Rousseau and Jacques Schrenzel and Martin Sundqvist and Sofia Viegas and Fanny Wegner and Aamot, \{Hege Vangstein\} and Stefan Niemann and Williamson, \{Deborah A.\} and Paula M{\"o}lling and Adrian Egli",

note = "Funding: We thank the University of Zurich and the Swedish “Nyckelfonden” - {\"O}rebro University hospital research Foundation, Akershus University Hospital, Genomic Medicine Sweden, and the Norwegian Surveillance Programme for Antimicrobial Resistance (NORM) for financial support of the conference. The UK Embassy in Switzerland provided a grant to invite two speakers.",

year = "2025",

month = oct,

day = "23",

doi = "10.1016/j.micinf.2025.105557",

language = "English",

volume = "27",

pages = "1--8",

journal = "Microbes and Infection",

issn = "1286-4579",

publisher = "Elsevier Masson s.r.l.",

number = "7",

}

Wei, KC, Purushothaman, S, Azzato, F, Baker, KS, Birkeland, KW, Brunet, S, Campos, J, Connor, TR, Giske, CG, Greub, G, Hallbäck, ET, Harmsen, D, Hodcroft, EB, Holden, MTG, Jacob, J, Kahles, A, Lagos, AC, Lipworth, S, Loo, E, Miotto, P, Neher, RA, Neves, A, Ready, D, Roloff, T, Rooney, A, Rousseau, E, Schrenzel, J, Sundqvist, M, Viegas, S, Wegner, F, Aamot, HV, Niemann, S, Williamson, DA, Mölling, P & Egli, A 2025, 'Conference report: The second bacterial genome sequencing Pan-European Network conference', Microbes and Infection, vol. 27, no. 7, 105557, pp. 1-8. https://doi.org/10.1016/j.micinf.2025.105557

TY - JOUR

T1 - Conference report: The second bacterial genome sequencing Pan-European Network conference

AU - Wei, Kuangyi Charles

AU - Purushothaman, Srinithi

AU - Azzato, Francesca

AU - Baker, Kate S.

AU - Birkeland, Kira Waagner

AU - Brunet, Sofia

AU - Campos, Josefina

AU - Connor, Thomas R.

AU - Giske, Christian G.

AU - Greub, Gilbert

AU - Hallbäck, Erika Tång

AU - Harmsen, Dag

AU - Hodcroft, Emma B.

AU - Holden, Matthew T.G.

AU - Jacob, Jobin

AU - Kahles, Andre

AU - Lagos, Amaya Campillay

AU - Lipworth, Samuel

AU - Loo, Elin

AU - Miotto, Paolo

AU - Neher, Richard A.

AU - Neves, Aitana

AU - Ready, Derren

AU - Roloff, Tim

AU - Rooney, Ashley

AU - Rousseau, Emilie

AU - Schrenzel, Jacques

AU - Sundqvist, Martin

AU - Viegas, Sofia

AU - Wegner, Fanny

AU - Aamot, Hege Vangstein

AU - Niemann, Stefan

AU - Williamson, Deborah A.

AU - Mölling, Paula

AU - Egli, Adrian

N1 - Funding: We thank the University of Zurich and the Swedish “Nyckelfonden” - Örebro University hospital research Foundation, Akershus University Hospital, Genomic Medicine Sweden, and the Norwegian Surveillance Programme for Antimicrobial Resistance (NORM) for financial support of the conference. The UK Embassy in Switzerland provided a grant to invite two speakers.

PY - 2025/10/23

Y1 - 2025/10/23

KW - Education

KW - Whole genome sequencing

KW - Data

KW - Surveillance

KW - Diagnostics

KW - Workshop

KW - Antimicrobial resistance

KW - Pathogen identification

UR - https://www.scopus.com/pages/publications/105013393517

U2 - 10.1016/j.micinf.2025.105557

DO - 10.1016/j.micinf.2025.105557

M3 - Article

SN - 1286-4579

VL - 27

SP - 1

EP - 8

JO - Microbes and Infection

JF - Microbes and Infection

IS - 7

M1 - 105557

ER -

Conference report: The second bacterial genome sequencing Pan-European Network conference

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