TY - JOUR
T1 - A Bayesian approach to fitting Gibbs processes with temporal random effects
AU - King, Ruth
AU - Illian, Janine Baerbel
AU - King, Stuart Edward
AU - Nightingale, Glenna Faith
AU - Hendrichsen, Ditte
N1 - This work is partially supported by Research Councils UK
PY - 2012/12
Y1 - 2012/12
N2 - We consider spatial point pattern data that have been observed repeatedly over a period of time in an inhomogeneous environment. Each spatial point pattern can be regarded as a “snapshot” of the underlying point process at a series of times. Thus, the number of points and corresponding locations of points differ for each snapshot. Each snapshot can be analyzed independently, but in many cases there may be little information in the data relating to model parameters, particularly parameters relating to the interaction between points. Thus, we develop an integrated approach, simultaneously analyzing all snapshots within a single robust and consistent analysis. We assume that sufficient time has passed between observation dates so that the spatial point patterns can be regarded as independent replicates, given spatial covariates. We develop a joint mixed effects Gibbs point process model for the replicates of spatial point patterns by considering environmental covariates in the analysis as fixed effects, to model the heterogeneous environment, with a random effects (or hierarchical) component to account for the different observation days for the intensity function. We demonstrate how the model can be fitted within a Bayesian framework using an auxiliary variable approach to deal with the issue of the random effects component. We apply the methods to a data set of musk oxen herds and demonstrate the increased precision of the parameter estimates when considering all available data within a single integrated analysis.
AB - We consider spatial point pattern data that have been observed repeatedly over a period of time in an inhomogeneous environment. Each spatial point pattern can be regarded as a “snapshot” of the underlying point process at a series of times. Thus, the number of points and corresponding locations of points differ for each snapshot. Each snapshot can be analyzed independently, but in many cases there may be little information in the data relating to model parameters, particularly parameters relating to the interaction between points. Thus, we develop an integrated approach, simultaneously analyzing all snapshots within a single robust and consistent analysis. We assume that sufficient time has passed between observation dates so that the spatial point patterns can be regarded as independent replicates, given spatial covariates. We develop a joint mixed effects Gibbs point process model for the replicates of spatial point patterns by considering environmental covariates in the analysis as fixed effects, to model the heterogeneous environment, with a random effects (or hierarchical) component to account for the different observation days for the intensity function. We demonstrate how the model can be fitted within a Bayesian framework using an auxiliary variable approach to deal with the issue of the random effects component. We apply the methods to a data set of musk oxen herds and demonstrate the increased precision of the parameter estimates when considering all available data within a single integrated analysis.
KW - Data augmentation
KW - Markov chainMonte Carlo
KW - Mixed effects model
KW - Muskoxen data
KW - Spatial and temporal point processes
UR - http://www.scopus.com/inward/record.url?scp=84871284107&partnerID=8YFLogxK
U2 - 10.1007/s13253-012-0111-0
DO - 10.1007/s13253-012-0111-0
M3 - Article
SN - 1085-7117
VL - 17
SP - 601
EP - 622
JO - Journal of Agricultural, Biological and Environmental Statistics
JF - Journal of Agricultural, Biological and Environmental Statistics
IS - 4
ER -