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Determining major general regulatory mechanisms in the ParaHox gene cluster

Project: Standard

Project Details

AcronymParaHox gene cluster
StatusFinished
Effective start/end date5/06/17 → 4/06/20

Funding

  • Leverhulme Trust: £167,182.00

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  • Transcriptional regulation of the Ciona Gsx gene in the neural plate

    Hudson, C., Esposito, R., Palladino, A., Staiano, L., Ferrier, D., Faure, E., Lemaire, P., Yasuo, H. & Spagnuolo, A., 15 Apr 2019, In: Developmental Biology. 448, 2, p. 88-100 13 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    File

  • Amphioxus functional genomics and the origins of vertebrate gene regulation

    Marletaz, F., Firbas, P., Maeso, I., Tena, J., Bogdanovic, O., Perry, M., Wyatt, C., de la Calle-Mustienes, E., Bertrand, S., Burguera, D., Acemel, R., van Heeringen, S., Naranjo, S., Herrera-Ubeda, C., Skvortsova, K., Jimenez-Gancedo, S., Aldea, D., Marquez, Y., Buono, L. & Kozmikova, I. & 41 others, Permanyer, J., Louis, A., Albuixech-Crespo, B., Le Petillon, Y., Leon Florian, A., Subirana, L., Balwierz, P. J., Duckett, P., Farahani, E., Aury, J. M., Mangenot, S., Wincker, P., Albalat, R., Benito-Gutierrez, E., Canestro, C., Castro, F., D'Aniello, S., Ferrier, D. E. K., Huang, S., Laudet, V., Marais, G., Pontarotti, P., Schubert, M., Seitz, H., Somorjai, I. M. L., Takahashi, T., Mirabeau, O., Xu, A., Yu, J.-K., Carninci, P., Martinez-Morales, J., Crollius, H., Kozmik, Z., Weirauch, M., Garcia-Fernandez, J., Lister, R., Lenhard, B., Holland, P., Escriva, H., Gomez-Skarmeta, J. L. & Irimia, M., 21 Nov 2018, In: Nature. 564, 7734, p. 64-70 29 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    File

  • Amphioxus SYCP1: a case of retrogene replacement and co-option of regulatory elements adjacent to the ParaHox cluster

    Garstang, M. G. & Ferrier, D. E. K., Jan 2018, In: Development Genes and Evolution. 228, 1, p. 13-30 18 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    File
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  • Amphioxus functional genomics and the origins of vertebrate gene regulation (next-generation sequencing data)

    Marletaz, F. (Creator), Firbas, P. (Creator), Maeso, I. (Creator), Tena, J. (Creator), Bogdanovic, O. (Creator), Perry, M. (Creator), Wyatt, C. (Creator), de la Calle-Mustienes, E. (Creator), Bertrand, S. (Creator), Burguera, D. (Creator), Acemel, R. (Creator), van Heeringen, S. (Creator), Naranjo, S. (Creator), Herrera-Ubeda, C. (Creator), Skvortsova, K. (Creator), Jimenez-Gancedo, S. (Creator), Aldea, D. (Creator), Marquez, Y. (Creator), Buono, L. (Creator), Kozmikova, I. (Creator), Permanyer, J. (Creator), Louis, A. (Creator), Albuixech-Crespo, B. (Creator), Le Petillon, Y. (Creator), Leon Florian, A. (Creator), Subirana, L. (Creator), Balwierz, P. J. (Creator), Duckett, P. (Creator), Farahani, E. (Creator), Aury, J. M. (Creator), Mangenot, S. (Creator), Wincker, P. (Creator), Albalat, R. (Creator), Benito-Gutierrez, E. (Creator), Canestro, C. (Creator), Castro, F. (Creator), D'Aniello, S. (Creator), Ferrier, D. E. K. (Creator), Huang, S. (Creator), Laudet, V. (Creator), Marais, G. (Creator), Pontarotti, P. (Creator), Schubert, M. (Creator), Seitz, H. (Creator), Somorjai, I. M. L. (Creator), Takahashi, T. (Creator), Mirabeau, O. (Creator), Xu, A. (Creator), Yu, J.-K. (Creator), Carninci, P. (Creator), Martinez-Morales, J. (Creator), Crollius, H. (Creator), Kozmik, Z. (Creator), Weirauch, M. (Creator), Garcia-Fernandez, J. (Creator), Lister, R. (Creator), Lenhard, B. (Creator), Holland, P. (Creator), Escriva, H. (Creator), Gomez-Skarmeta, J. L. (Creator) & Irimia, M. (Creator), Gene Expression Omnibus (GEO), 15 Aug 2018

    http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE106372 and 5 more links, http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE106428, http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE106429, http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE106430, http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE102144, http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE115945 (show fewer)

    Dataset

  • Amphioxus functional genomics and the origins of vertebrate gene regulation (Raw genome sequencing data)

    Marletaz, F. (Creator), Firbas, P. (Creator), Maeso, I. (Creator), Tena, J. (Creator), Bogdanovic, O. (Creator), Perry, M. (Creator), Wyatt, C. (Creator), de la Calle-Mustienes, E. (Creator), Bertrand, S. (Creator), Burguera, D. (Creator), Acemel, R. (Creator), van Heeringen, S. (Creator), Naranjo, S. (Creator), Herrera-Ubeda, C. (Creator), Skvortsova, K. (Creator), Jimenez-Gancedo, S. (Creator), Aldea, D. (Creator), Marquez, Y. (Creator), Buono, L. (Creator), Kozmikova, I. (Creator), Permanyer, J. (Creator), Louis, A. (Creator), Albuixech-Crespo, B. (Creator), Le Petillon, Y. (Creator), Leon Florian, A. (Creator), Subirana, L. (Creator), Balwierz, P. J. (Creator), Duckett, P. (Creator), Farahani, E. (Creator), Aury, J. M. (Creator), Mangenot, S. (Creator), Wincker, P. (Creator), Albalat, R. (Creator), Benito-Gutierrez, E. (Creator), Canestro, C. (Creator), Castro, F. (Creator), D'Aniello, S. (Creator), Ferrier, D. E. K. (Creator), Huang, S. (Creator), Laudet, V. (Creator), Marais, G. (Creator), Pontarotti, P. (Creator), Schubert, M. (Creator), Seitz, H. (Creator), Somorjai, I. M. L. (Creator), Takahashi, T. (Creator), Mirabeau, O. (Creator), Xu, A. (Creator), Yu, J.-K. (Creator), Carninci, P. (Creator), Martinez-Morales, J. (Creator), Crollius, H. (Creator), Kozmik, Z. (Creator), Weirauch, M. (Creator), Garcia-Fernandez, J. (Creator), Lister, R. (Creator), Lenhard, B. (Creator), Holland, P. (Creator), Escriva, H. (Creator), Gomez-Skarmeta, J. L. (Creator) & Irimia, M. (Creator), European Nucleotide Archive (ENA), 2018

    https://www.ebi.ac.uk/ena/data/search?query=PRJEB13665

    Dataset