Oscar Eduardo Gaggiotti

Search results

• Replication data and scripts for: Ancient dolphin genomes reveal rapid repeated adaptation to coastal waters

  Louis, M. (Creator), Korlević, P. (Creator), Nykänen, M. (Creator), Archer, F. (Creator), Berrow, S. (Creator), Brownlow, A. (Creator), Lorenzen, E. (Creator), O'Brien, J. (Creator), Post, K. (Creator), Racimo, F. (Creator), Rogan, E. (Creator), Rosel, P. (Creator), Sinding, M. (Creator), Van Der Es, H. (Creator), Wales, N. (Creator), Fontaine, M. C. (Creator), Gaggiotti, O. (Creator) & Foote, A. (Creator), DataSuds, 2023

  DOI: 10.23708/dabawd

  Dataset

• KLFDAPC: a supervised machine learning approach for spatial genetic structure analysis (dataset)

  Gaggiotti, O. E. (Creator), European Nucleotide Archive (ENA), 2022

  https://www.ebi.ac.uk/ena/browser/view/PRJNA289433?show=analyses

  Dataset

• Cultural traditions across a migratory network shape the genetic structure of southern right whales around Australia and New Zealand (dataset)

  Carroll, E. L. (Creator), Baker, C. S. (Creator), Watson, M. (Creator), Alderman, R. (Creator), Bannister, J. (Creator), Gaggiotti, O. E. (Creator), Gröcke, D. (Creator), Patenaude, N. (Creator) & Harcourt, R. (Creator), Dryad, 13 Nov 2015

  DOI: 10.5061/dryad.cc2kq

  Dataset

• Genetic diversity and connectivity of southern right whales (Eubalaena australis) found in the Brazil and Chile–Peru wintering grounds and the South Georgia (Islas Georgias del Sur) feeding ground (dataset)

  Gaggiotti, O. E. (Creator), Dryad, 2020

  DOI: 10.5061/dryad.pg4f4qrk8

  Dataset

• Data from: The DNA of coral reef biodiversity: predicting and protecting genetic diversity of reef assemblages

  Selkoe, K. (Creator), Gaggiotti, O. E. (Creator), Treml , E. (Creator), Donovan , M. (Creator) & Toonen, R. (Creator), Dryad, 21 Apr 2016

  DOI: 10.5061/dryad.qm288

  Dataset

• Identifying consistent allele frequency differences in studies of stratified populations (dataset - Dryad)

  Wiberg, R. A. W. (Creator), Gaggiotti, O. E. (Creator), Morrissey, M. B. (Creator) & Ritchie, M. G. (Creator), Dryad, 2017

  DOI: 10.5061/dryad.mn0tv, http://datadryad.org/resource/doi:10.5061/dryad.60k68

  Dataset

• Selection on ancestral genetic variation fuels repeated ecotype formation in bottlenose dolphins (code)

  Gaggiotti, O. E. (Creator), GitHub, 2021

  https://github.com/besibo/GhostAncestry

  Dataset: Software

• Collecting baleen whale blow samples by drone: a minimally intrusive tool for conservation genetics (dataset)

  O'Mahony, É. N. A. (Creator), Sremba, A. (Creator), Keen, E. (Creator), Robinson, N. (Creator), Dundas, A. (Creator), Steel, D. (Creator), Wray, J. (Creator), Baker, S. (Creator) & Gaggiotti, O. E. (Creator), Dryad, 2024

  DOI: 10.5061/dryad.6djh9w185

  Dataset

• Speciation in the deep: genomics and morphology reveal a new species of beaked whale

  Carroll, E. L. (Contributor), McGowen, M. R. (Contributor), McCarthy, M. L. (Contributor), Marx, F. G. (Contributor), Aguilar De Soto, N. (Contributor), Dalebout, M. L. (Contributor), Dreyer, S. (Contributor), Gaggiotti, O. E. (Contributor), Hansen, S. S. (Contributor), Van Helden, A. (Contributor), Onoufriou, A. B. (Contributor), Baird, R. W. (Contributor), Baker, C. S. (Contributor), Berrow, S. (Contributor), Cholewiak, D. (Contributor), Claridge, D. (Contributor), Constantine, R. (Contributor), Davison, N. J. (Contributor), Eira, C. (Contributor), Fordyce, R. E. (Contributor), Gatesy, J. (Contributor), Hofmeyr, G. J. G. (Contributor), Martin, V. (Contributor), Mead, J. G. (Contributor), Mignucci-Giannoni, A. A. (Contributor), Morin, P. A. (Contributor), Reyes, C. (Contributor), Rogan, E. (Contributor), Rosso, M. (Contributor), Silva, M. A. (Contributor), Springer, M. S. (Contributor), Steel, D. (Contributor) & Olsen, M. T. (Contributor), Dryad, 22 Oct 2021

  DOI: 10.5061/dryad.wpzgmsbnq

  Dataset

• Identifying consistent allele frequency differences in studies of stratified populations (dataset - GitHub)

  Wiberg, R. A. W. (Creator), Gaggiotti, O. E. (Creator), Morrissey, M. B. (Creator) & Ritchie, M. G. (Creator), GitHub, 2017

  https://github.com/RAWWiberg/ER_PoolSeq_Simulations

  Dataset

• C++ code from "Estimating contemporary migration rates: effect and joint inference of inbreeding, null alleles and mistyping"

  Robledo-Arnuncio (Juan J Robledo-Arnuncio), J. J. (Creator) & Gaggiotti, O. E. (Creator), Figshare, 15 Nov 2016

  DOI: 10.6084/m9.figshare.3984000.v3

  Dataset: Software

• Incorporating non-equilibrium dynamics into demographic history inferences of a migratory marine species (dataset)

  Carroll, E. L. (Creator), Alderman, R. (Creator), Bannister, J. L. (Creator), Bérube, M. (Creator), Best, P. B. (Creator), Boren, L. (Creator), Baker, C. S. (Creator), Constantine, R. (Creator), Findlay, K. (Creator), Harcourt, R. (Creator), Lemaire, L. (Creator), Palsbøll, P. J. (Creator), Rowntree, V. J. (Creator), Seger, J. (Creator), Steel, D. (Creator), Valenzuela, L. O. (Creator), Watson, M. (Creator) & Gaggiotti, O. E. (Creator), Dryad, 3 May 2018

  DOI: 10.5061/dryad.vv5347p, http://dx.doi.org/10.1038/s41437-018-0077-y

  Dataset

• Deciphering signatures of natural selection via deep learning (code)

  Gaggiotti, O. E. (Creator), GitHub, 2022

  https://github.com/xinghuq/DeepGenomeScan

  Dataset: Software

• Perturbation drives changing metapopulation dynamics in a top marine predator (dataset)

  Carroll, E. L. (Creator), Hall, A. J. (Creator), Onoufriou, A. (Creator), Gaggiotti, O. E. (Creator) & Russell, D. J. (Creator), Dryad, 10 Aug 2020

  DOI: 10.5061/dryad.j9kd51c8j

  Dataset

• Ctenomys control region, partial sequence; mitochondrial.

  Fernandez, M. J. G. (Creator), Gaggiotti, O. E. (Creator) & Mirol, P. M. (Creator), National Center for Biotechnology Information, 2012

  https://www.ncbi.nlm.nih.gov/popset?DbFrom=nuccore&Cmd=Link&LinkName=nuccore_popset&IdsFromResult=385210996 and one more link, http://onlinelibrary.wiley.com/doi/10.1111/j.1365-294X.2012.05598.x/full (show fewer)

  Dataset

• Information-based summary statistics for spatial genetic structure inference (dataset)

  Qin, X. (Creator) & Gaggiotti, O. E. (Creator), Zenodo, 2022

  https://zenodo.org/record/6197846#.Yhdq6-hBxPY

  Dataset

• KLFDAPC: a supervised machine learning approach for spatial genetic structure analysis (code)

  Gaggiotti, O. E. (Creator), GitHub, 2022

  https://github.com/xinghuq/KLFDAPC

  Dataset: Software

• Data for: Competing adaptations maintain non-adaptive variation in a wild cricket population

  Rayner, J. (Creator), Eichenberger, F. (Creator), Bainbridge, J. (Creator), Zhang, S. (Creator), Zhang, X. (Creator), Yusuf, L. (Creator), Balenger, S. (Creator), Gaggiotti, O. (Creator) & Bailey, N. (Creator), Digital Repository at the University of Maryland, 2024

  DOI: 10.13016/ehst-57yz

  Dataset

• Replication Data for the manuscript Selection on ancient genetic variants fuels repeated ecotype formation in bottlenose dolphins

  Louis, M. (Creator), Galimberti, M. (Creator), Archer, F. (Creator), Berrow, S. (Creator), Brownlow, A. (Creator), Fallon, R. (Creator), Nykänen, M. (Creator), O'Brien, J. (Creator), Robertson, K. (Creator), Rosel, P. E. (Creator), Simon-Bouhet, B. (Creator), Wegmann, D. (Creator), Fontaine, M. (Creator), Foote, A. (Creator) & Gaggiotti, O. E. (Creator), Dataverse, 2021

  DOI: 10.23708/Q2MYHE

  Dataset

• DNA in the deep: Comparative molecular ecology for the conservation of beaked whales (thesis data)

  Onoufriou, A. (Creator), Carroll, E. L. (Creator) & Gaggiotti, O. E. (Creator), University of St Andrews, 25 Apr 2023

  DOI: 10.17630/411968f3-6191-4789-8316-90fa2c3473c4, https://doi.org/10.17630/sta/487

  Dataset: Thesis dataset

  File

• Accounting for stochasticity in demographic compensation along the elevational range of an alpine plant (dataset)

  Andrello, M. (Creator), de Villemereuil, P. (Creator), Carboni, M. (Creator), Busson, D. (Creator), Fortin, M.-J. (Creator), Gaggiotti, O. E. (Creator) & Till-Bottraud, I. (Creator), GitHub, 2020

  https://github.com/MarcoAndrello/Stoch_Demogr_Comp_Arabis

  Dataset