PopPIPE on vancomycin resistant Enterococcus faecium

John Lees (Creator)
Martin Patrick McHugh (Creator)

School of Medicine

Dataset

Description

Input files and output of PopPIPE run on vancomycin resistant Enterococcus faecium, as documented in the example usage in the README.

Date made available	2025
Publisher	Figshare

Contact

[email protected]

DOI
10.6084/m9.figshare.28495571.v1

1 Article

Integrated population clustering and genomic epidemiology with PopPIPE
McHugh, M. P., Horsfield, S. T., von Wachsmann, J., Toussaint, J., Pettigrew, K. A., Czarniak, E., Evans, T. J., Leanord, A., Tysall, L., Gillespie, S. H., Templeton, K. E., Holden, M. T. G., Croucher, N. J. & Lees, J. A., 28 Apr 2025, In: Microbial Genomics. 11, 4, p. 1-9 9 p., 001404.
Research output: Contribution to journal › Article › peer-review

Open Access
File

VREfm Nosocomial Outbreak WGS Investigation
McHugh, M. P. (Creator), Gillespie, S. H. (Creator) & Holden, M. (Creator), NCBI GenBank, 2025
https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA997588
Dataset

Cite this