Description
The attached data files are from the analysis of soil samples collected during the University of St Andrews "Microbiome of Scotland" Public Engagement Activity. The posterior data generated from this activity forms the pilot study for the "Antibiotics under our feet" Citizen Science project funded by a SCOTPen Wellcome Engagement Award to Clarissa Melo Czekster, University of St Andrews.
The following files types and formats are included:
- Soil sample data ID, collection location and alpha diversity statistics in .xlsx format (Excel spreadsheet)
- Raw sequence files; text-based format for representing nucleotide or amino acid sequence with quality data: .fastq (zipped, can be opened with a text editor)
- Sequencing visualisation file .qzv (qiime zipped visualisation, proprietary format, can be opened in web browser) and sample barplot image file with legend file in .png format
More details on the software required are provided in the Readme.txt file.
The following files types and formats are included:
- Soil sample data ID, collection location and alpha diversity statistics in .xlsx format (Excel spreadsheet)
- Raw sequence files; text-based format for representing nucleotide or amino acid sequence with quality data: .fastq (zipped, can be opened with a text editor)
- Sequencing visualisation file .qzv (qiime zipped visualisation, proprietary format, can be opened in web browser) and sample barplot image file with legend file in .png format
More details on the software required are provided in the Readme.txt file.
| Date made available | 2020 |
|---|---|
| Publisher | University of St Andrews |
Projects
- 1 Finished
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Antibiotics under our feet: Antibiotics under our feet
Melo Czekster, C. (PI)
1/03/20 → 31/05/23
Project: Standard
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Closing the loop: the “Antibiotics under our feet” project
Ross, K. S., Melo Czekster, C. & Cornwell, R. M., 9 Aug 2024. 1 p.Research output: Contribution to conference › Poster › peer-review
Open Access -
Unearthing new learning opportunities: adapting and innovating through the 'Antibiotics Under Our Feet' citizen science project in Scotland during COVID-19
Cornwell, R. M., Ross, K. S., Gibeily, C., Guthrie, I., Li, P. H., Seeley, L. T., Kong, Y., True, A., Barnes, A., Nimmo, E., Len, G., Oprea, I., Lin, B., Sasi, A., Chu, V., Davidson, C., Ulasavets, D., Renouf-Bilanski, G., Dmitrieva, M. & Leung, Y. & 9 others, , 19 Jun 2024, In: Access Microbiology. 6, 6, 13 p., acmi000710.v3.Research output: Contribution to journal › Article › peer-review
Open AccessFile -
Antibiotics under our feet
Cornwell, R. M., Melo Czekster, C., Gibeily, C., Ionescu, D., Harper, S., Kennedy, M., Sutherland, E. J., Simpson, M. C., Easton, E., Vaughan, R., Jones, C. E., Lynch, R., Yong, E., Athukoralage, J. S., Hogrel, G., Zickuhr, G. M., Hynes, J., Williams, R.-J., Ross, K. S. & Kruger, L. & 9 others, , 24 Apr 2023, University of St Andrews.Research output: Other contribution
Open Access
Datasets
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"Antibiotics under our feet" Bioinformatics Taxonomic and Functional Profiling
Cornwell, R. M. (Creator), Oresegun, D. R. (Creator), Melo Czekster, C. (Creator) & Thorpe, P. J. (Contributor), University of St Andrews, 20 Dec 2022
DOI: 10.17630/4975c6ad-8e73-46af-a477-c1643c4efdf4
Dataset
File